Why Your Puppy Whines in the Crate — and What You Can Do About It

“A crate isn’t a cage — it’s a comfort zone. When introduced gently, it becomes a puppy’s safe place to rest, reset, and feel secure.””
— Sara Perceval, Accredited Dog Trainer

Crate training can feel like a dream… until the whining starts.

Whether it’s a heartbreaking whimper, a persistent cry, or a full-blown 2 a.m. meltdown, crate whining is one of the most common struggles puppy parents face.

But here’s the good news: your puppy isn’t being “naughty” — they’re communicating. And with the right support, you can help them settle calmly and confidently in the crate.

Why Is My Puppy Whining in the Crate?

Whining can be caused by several things — and understanding why is the key to helping your pup feel safe.

  • They need the toilet
    Puppies have tiny bladders, especially under 12 weeks old. If your puppy is whining after a nap, during the night, or first thing in the morning, they might be telling you they need a wee.

Tip: Always give your pup a toilet break before and after crate time. Keep a log using my Crate Confidence Tracker.

  • They’re lonely or anxious
    Your puppy might not be used to being alone or separated from you. Early independence building is so important — but it has to be done gradually.

🎥 Watch: TikTok: “How I Build Crate Confidence Step-by-Step”

3. They’re not ready for longer crate sessions yet
Many pups are plonked in the crate for long periods too soon. This causes frustration and builds a negative association.

🎥 Watch: TikTok “This is what crate progress actually looks like”

What You Can Do to Help

✅ 1. Rebuild crate confidence from the beginning
Start with short, positive sessions during the day. Use food, play, and calming enrichment to help the crate feel like a safe, happy space.

If you would like some fun crate training games and settling cheatsheet you can play with your puppy, you can find this in my Crate Training Quick Start Bundle

✅ 2. Stay close (especially at night)
If your puppy is still little, sleeping nearby helps them feel secure. You can gradually move away over time using the “fading” method.

✅ 3. Avoid punishing the whining
Whining is a stress signal. Instead of ignoring or correcting, try to figure out the cause and support your pup. Responding calmly and consistently teaches trust.

✅ 4. Try a settle cue and soothing tools
Introduce a calm verbal cue like “Shhh” or “Settle,” and pair it with a LickiMat, gentle music, or your scent on a blanket.

You’re Not Alone

If your crate training journey feels hard right now — you’re not failing. You’re learning. And so is your puppy.

I’ve helped dozens of overwhelmed puppy parents get from nightly whining to peaceful naps, and you can get there too.

🛒 Want Everything in One Place?

Get the Crate Training Bundle — just £9.00 (instead of £15.00)
Includes:

  • Printable Crate Confidence Tracker

  • Crate Games + Settle Cheatsheet

  • Common Mistakes Mini-Guide

  • Bonus Nap Schedule